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| Both sides previous revision Previous revision Next revision | Previous revisionLast revisionBoth sides next revision | ||
| doku:job_chains [2014/06/03 13:35] – [Solution I] ir | doku:job_chains [2014/06/05 12:56] – [Solution II] ir | ||
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| There are several ways how to create job chains and we will discuss three different solutions below: | There are several ways how to create job chains and we will discuss three different solutions below: | ||
| ==== Solution I ===== | ==== Solution I ===== | ||
| - | Create one single job script and list several different jobs inside it. E.g.: | + | Create one single job script, e.g., named // |
| < | < | ||
| - | user@l01 $ cat allInOne.sge | ||
| #$ -N allInOne | #$ -N allInOne | ||
| Line 28: | Line 27: | ||
| The job identifier may be the **job id** or the **job name**. | The job identifier may be the **job id** or the **job name**. | ||
| - | The script of the first job is called holdJob.sge: | + | The script of the first job is called |
| < | < | ||
| - | user@l01 $ cat holdJob.sge | ||
| #$ -N holdJob | #$ -N holdJob | ||
| ./doJob1 | ./doJob1 | ||
| </ | </ | ||
| - | The script of the interdependent second job is called Job2.sge: | + | The script of the interdependent second job is called |
| < | < | ||
| - | user@l01 $ cat Job2.sge | ||
| #$ -N Job2 | #$ -N Job2 | ||
| #$ -hold_jid holdJob | #$ -hold_jid holdJob | ||
| Line 44: | Line 41: | ||
| ./doJob2 | ./doJob2 | ||
| </ | </ | ||
| - | ... | + | job submission: |
| < | < | ||
| user@l01 $ qsub holdJob.sge | user@l01 $ qsub holdJob.sge | ||