==== Single-particle IMage Processing Linux Engine ====
=== simple2 ===
compilation works only with gcc4.8.2 / gfortran4.8.2
.bashrc:
PATH=/opt/sw/gcc/4.8.2/bin:$PATH
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/sw/gcc/4.8.2/lib64
compilation (use fftw that comes with simple):
export FFTWLIB=/home/lv70172/blaas/software/simple2/fftw/lib
./simple_compile.pl prg=all_fast mac=no compiler=gfortran
running:
simple_rndrec stk=stack_for_simple.spi box=240 smpd=1.89 nthr=4
=== simple2 parallel ===
basic parallelization, ie. single tasks are calculated simultanously on several nodes
script to run the different steps (should be done via a cronjob)
{{:doku:simple:run_simple_vsc.sh}}
adjusted distr_simple_prime_vsc2.pl:
{{:doku:simple:distr_simple_prime_vsc2.pl}}