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doku:advanced_sge [2014/05/27 13:55] – irdoku:advanced_sge [2014/07/11 08:03] – [Job arrays with multiple task within one SGE task step] markus
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- 
-    * [[advanced_sge#Job chains|Job chains]] 
-    * [[advanced_sge#Job arrays|Job arrays]] 
-==== Copying back data from a temp. directory after a job is terminated ==== 
-Please refer to [[doku:epilog|user-defined epilog scripts]]! 
- 
 ==== Specifying the maximum runtime (means quicker job execution) / resource reservation ==== ==== Specifying the maximum runtime (means quicker job execution) / resource reservation ====
 === The problem === === The problem ===
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 do do
         TASK=`expr ${SGE_TASK_ID} + $i`         TASK=`expr ${SGE_TASK_ID} + $i`
-        CMD="run file_$TASK"+        CMD="run file_$TASK &"
         #or          #or 
-        #CMD="mpirun -np $SLOTS ./a.out $TASK"+        #CMD="mpirun -np $SLOTS ./a.out $TASK &"
         $CMD           $CMD  
 done done
 +wait
  
 </code> </code>
  • doku/advanced_sge.txt
  • Last modified: 2015/01/22 09:57
  • by ir