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No ACL setup yet! Denying access to everyone.
No ACL setup yet! Denying access to everyone.
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No ACL setup yet! Denying access to everyone.
No ACL setup yet! Denying access to everyone.
No ACL setup yet! Denying access to everyone.
No ACL setup yet! Denying access to everyone.
No ACL setup yet! Denying access to everyone.
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- slurm_sacct @doku
- ber of nodes per job and the time difference from start to end {{ :doku:corehours.png?500 |}} === Usage of the script === You may give start time ''-S ...'' and end time ''-E ...''. Default start time on the clusters is the start of VSC-3, 2015-04-01T00:00:00, default end time is today. Instead you
- bigdata @doku
- rt PDSH_RCMD_TYPE=ssh prolog_create_key.sh . vsc_start_hadoop.sh . vsc_start_spark.sh spark-submit --master yarn --deploy-mode client --num-executors 140 \ ... etup scripts which create temporary ssh keys, and start Hadoop and Spark services in user context on the nodes of the job, * commands to start our job with '''spark-submit''', and * a script
- jupyterhub @doku
- memory suited to your requirements.</box> ===== Start a new Jupyter server ===== choose a profile: *... unning time. After everything is selected, press start - your server will start and show you the JupyterLab interface or the simpler Notebook interface. In bot... hoose the appropriate type. The new notebook will start in a new browser tab. It will show up as untitled
- 07_graphical_apps @pandoc:introduction-to-mul-cluster:01_introduction
- ] slides for more technical details ---- ===== start VNC desktop ===== * start VNC server (e.g. on login node 1): <code> vncserver -geometry 1920x1080 -d... t/sw/x86_64/generic/abaqus/Commands/abq2017 xpra start \ --daemon=no \ --exit-with-children=yes \ --start-child="$abq cae -mesa" </code> ---- ===== Job
- node_access_job_control @pandoc:introduction-to-vsc:06_node_access_job_control
- ====== Interactive jobs: salloc ====== <HTML><ol start="2" style="list-style-type: decimal;"></HTML> <HT... ROR_USER_GROUP=220 ERROR_USER_HOME=221 ERROR_GPFS_START=228 ERROR_GPFS_MOUNT=229 ERROR_GPFS_UNMOUNT=230 <... sacct -j 409878 -o jobid,jobname,cluster,nodelist,Start,End,cputime,cputimeraw,ncpus,qos,account,ExitCode... JobName Cluster NodeList Start End CPUTime CPUTimeRAW NC
- forge @doku
- # a second terminal will be needed to actually start the debug session my_uid@l35$ cd wherever/my/ap... # a second terminal will be needed to actually start the debug session my_uid@l34$ ssh n305-044 ... it and click Run and the usual debug session will start ) </code> ==== Further Reading: ==== ''/opt/s
- papi_ll_c @doku
- cyc0 = PAPI_get_real_cyc(); // PAPI Counting Start if (PAPI_start(eventset) != PAPI_OK) { printf("PAPI start error !\n"); exit(996); } //*** Here fo
- papi_ll_fortran @doku
- _real_cyc(c0) C C PAPI Counting Start C call PAPIF_start(evntst, check) if (check.ne.PAPI_OK) then write(6,*) 'PAPI start error !' write(6,*) '03 check:',
- paraview @doku
- jobs, then the time until this job would actually start can be used by jobs which fit into the remaining ... n the job's master node. Then on the master node start the paraview server with the following command: <... client can be connected to this server process. Start the client on your workstation (e.g.): <code># pa
- python @doku
- n with Conda ===== To install a new environment, start with creating an **environment yaml file** and st... hon --version Python 3.10.11 </code> You can now start developing and even use the environment in a slur... you up and running in no time. Note: Before you start, make sure that you have loaded the python versio
- smrtanalysis @doku
- s_HOME ./smrtanalysis/admin/bin/smrtportald-initd start export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:${SMRTAna... e>salloc -p mem_0128 --qos=normal_0128</code> - start server on allocated: <code>srun $SMRTAnalysis_HOME/smrtanalysis/admin/bin/smrtportald-initd start</code> - create SSH tunnel * on the logi
- vsc1 @doku
- ===== User Documentation ===== *[[vsc1#Quick Start|Quick Start]] *[[doku:advanced_sge|Advanced SGE topics]] *[[software_vsc1|Available software packa... *[[doku:xeonphi|Using Intel Xeon Phi]] ==== Quick Start ==== - Log in to your university's designated l
- 04_slurm @pandoc:introduction-to-mul-cluster:01_introduction
- USER GROUP PARTITION PRIORITY START_TIME NAME NODES NODELIST STATE 555 us... ask will be treated as a seperate job * example start=1, end=30, stepwidth=7: <code> #!/bin/sh #SBATCH... any:<job_id> srun ./my_program </code> <HTML><ol start="3" style="list-style-type: decimal;"></HTML> <HT
- matlab @doku
- nfiguration ==== After logging into the cluster, start MATLAB. On the Home tab, click Parallel > Discov... mple(iter) if nargin==0 iter = 8; end disp('Start sim') t0 = tic; parfor idx = 1:iter A(idx) =
- monitoring @doku
- '', to connect to the given node. Type ''top'' to start a simple task manager: <code sh> [myuser@l42]$ s... in a new terminal, type ''watch nvidia-smi'', to start a simple task manager for the graphics card. ''wa