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slurm_sacct @doku: 15 Hits, Last modified: 2 months ago; ber of nodes per job and the time difference from start to end {{ :doku:corehours.png?500 |}} === Usage of the script === You may give start time ''-S ...'' and end time ''-E ...''. Default start time is the start of VSC-3 (even on VSC4), 2015-04-01T00:00:00, default end time is today. Instead you m
bigdata @doku: 8 Hits, Last modified: 3 months ago; oop module load spark prolog_create_key.sh . vsc_start_hadoop.sh . vsc_start_spark.sh export SPARK_EXAMPLES=${HOME}/BigData/SparkDistributionExamples/ spark-... etup scripts which create temporary ssh keys, and start Hadoop and Spark services in user context on the nodes of the job, * commands to start our job with '''spark-submit''', and * a script
node_access_job_control @pandoc:introduction-to-vsc:06_node_access_job_control: 6 Hits, Last modified: 2 years ago; ====== Interactive jobs: salloc ====== <HTML><ol start="2" style="list-style-type: decimal;"></HTML> <HT... ROR_USER_GROUP=220 ERROR_USER_HOME=221 ERROR_GPFS_START=228 ERROR_GPFS_MOUNT=229 ERROR_GPFS_UNMOUNT=230 <... sacct -j 409878 -o jobid,jobname,cluster,nodelist,Start,End,cputime,cputimeraw,ncpus,qos,account,ExitCode... JobName Cluster NodeList Start End CPUTime CPUTimeRAW NC
07_graphical_apps @pandoc:introduction-to-mul-cluster:01_introduction: 6 Hits, Last modified: 2 years ago; ] slides for more technical details ---- ===== start VNC desktop ===== * start VNC server (e.g. on login node 1): <code> vncserver -geometry 1920x1080 -d... t/sw/x86_64/generic/abaqus/Commands/abq2017 xpra start \ --daemon=no \ --exit-with-children=yes \ --start-child="$abq cae -mesa" </code> ---- ===== Job
jupyterhub @doku: 5 Hits, Last modified: 9 days ago; memory suited to your requirements.</box> ===== Start a new Jupyter server ===== choose a profile: *... unning time. After everything is selected, press start - your server will start and show you the JupyterLab interface or the simpler Notebook interface. In bot... hoose the appropriate type. The new notebook will start in a new browser tab. It will show up as untitled
04_slurm @pandoc:introduction-to-mul-cluster:01_introduction: 3 Hits, Last modified: 2 years ago; USER GROUP PARTITION PRIORITY START_TIME NAME NODES NODELIST STATE 555 us... ask will be treated as a seperate job * example start=1, end=30, stepwidth=7: <code> #!/bin/sh #SBATCH... any:<job_id> srun ./my_program </code> <HTML><ol start="3" style="list-style-type: decimal;"></HTML> <HT
forge @doku: 3 Hits, Last modified: 5 months ago; ( a second terminal will be needed to actually start the debug session ) --></html> <html><!-- my_u... ( a second terminal will be needed to actually start the debug session ) my_uid@l34$ ssh n305-0... it and click Run and the usual debug session will start ) ==== Further Reading: ==== ''/opt/sw/x86_6
paraview @doku: 3 Hits, Last modified: 6 years ago; jobs, then the time until this job would actually start can be used by jobs which fit into the remaining ... n the job's master node. Then on the master node start the paraview server with the following command: <... client can be connected to this server process. Start the client on your workstation (e.g.): <code># pa
papi_ll_fortran @doku: 3 Hits, Last modified: 7 years ago; _real_cyc(c0) C C PAPI Counting Start C call PAPIF_start(evntst, check) if (check.ne.PAPI_OK) then write(6,*) 'PAPI start error !' write(6,*) '03 check:',
vsc1 @doku: 3 Hits, Last modified: 9 years ago; ===== User Documentation ===== *[[vsc1#Quick Start|Quick Start]] *[[doku:advanced_sge|Advanced SGE topics]] *[[software_vsc1|Available software packa... *[[doku:xeonphi|Using Intel Xeon Phi]] ==== Quick Start ==== - Log in to your university's designated l
papi_ll_c @doku: 3 Hits, Last modified: 7 years ago; cyc0 = PAPI_get_real_cyc(); // PAPI Counting Start if (PAPI_start(eventset) != PAPI_OK) { printf("PAPI start error !\n"); exit(996); } //*** Here fo
smrtanalysis @doku: 3 Hits, Last modified: 6 years ago; s_HOME ./smrtanalysis/admin/bin/smrtportald-initd start export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:${SMRTAna... e>salloc -p mem_0128 --qos=normal_0128</code> - start server on allocated: <code>srun $SMRTAnalysis_HOME/smrtanalysis/admin/bin/smrtportald-initd start</code> - create SSH tunnel * on the logi
git @pandoc:git:01_general: 2 Hits, Last modified: 2 years ago; kflow 2 ==== Combined like this is a good way to start working: * Start by syncing the progress of upstream <code bash> git checkout master git pull origi
usif @doku: 2 Hits, Last modified: 6 years ago; to totally different places, but we recommend to start from a common base path: <code> export my_usif_pa... f_path/src/gnuplot/5.0.5/gnuplot-5.0.5.tar.gz * Start the installation with: <code> source ~/.bashrc so
newsletter20100610 @doku: 2 Hits, Last modified: 8 years ago; wien.ac.at ssh -X <username>@vsc.boku.ac.at</code>Start GaussView via:\\ <code>/opt/gv/gview</code> * ... Wiki with user documentation is available [[doku:start|here]].\\ Login with your VSC username and passwo
welcome @wiki: 2 Hits, Last modified: 6 years ago
backup @doku: 2 Hits, Last modified: 18 months ago
vsc3_gpu @doku: 2 Hits, Last modified: 5 years ago
slurm1 @doku: 2 Hits, Last modified: 3 years ago
storage_infrastructure @pandoc:introduction-to-vsc:08_storage_infrastructure: 2 Hits, Last modified: 2 years ago
monitoring @doku: 2 Hits, Last modified: 2 weeks ago
slurm @doku: 2 Hits, Last modified: 2 weeks ago
papi_hl_fortran @doku: 1 Hits, Last modified: 7 years ago
manual_jupyter_server @doku:jupyter: 1 Hits, Last modified: 2 weeks ago
vsc5quickstart @doku: 1 Hits, Last modified: 6 weeks ago
r-project @doku: 1 Hits, Last modified: 7 years ago
vsc2quickstart @doku: 1 Hits, Last modified: 8 years ago
sge @doku: 1 Hits, Last modified: 7 years ago
syntax @wiki: 1 Hits, Last modified: 6 years ago
desmond @doku: 1 Hits, Last modified: 10 years ago
time @doku: 1 Hits, Last modified: 8 years ago
sequential-codes @doku: 1 Hits, Last modified: 10 years ago
gpaw @doku: 1 Hits, Last modified: 9 years ago
large @doku: 1 Hits, Last modified: 11 years ago
scalapack @doku: 1 Hits, Last modified: 11 years ago
newsletter20101008 @doku: 1 Hits, Last modified: 8 years ago
teststart @doku: 1 Hits, Last modified: 9 years ago
connecting_to_vsc @pandoc:introduction-to-vsc:02_connecting_to_vsc: 1 Hits, Last modified: 5 days ago
slurm_multisite_admin @doku: 1 Hits, Last modified: 3 months ago
cfd @doku: 1 Hits, Last modified: 3 months ago
05_user_software @pandoc:introduction-to-mul-cluster:01_introduction: 1 Hits, Last modified: 2 years ago
ansys @doku: 1 Hits, Last modified: 7 months ago
python @doku: 1 Hits, Last modified: 35 hours ago
testquickstart @doku: 1 Hits, Last modified: 9 years ago
start: 1 Hits, Last modified: 9 months ago
rstat @doku: 1 Hits, Last modified: 18 months ago
vsc2 @doku: 1 Hits, Last modified: 14 months ago
lbd @doku: 1 Hits, Last modified: 22 months ago
01_singularity @pandoc:introduction-to-vsc:14_singularity: 1 Hits, Last modified: 2 years ago
slurm @pandoc:introduction-to-vsc:05_submitting_batch_jobs: 1 Hits, Last modified: 2 years ago
05_commands @pandoc:introduction-to-mul-cluster:02_slurm: 1 Hits, Last modified: 5 years ago
vnc @doku: 1 Hits, Last modified: 5 years ago
connecting_to_vsc-20200925 @pandoc:introduction-to-vsc:02_connecting_to_vsc: 1 Hits, Last modified: 2 years ago
02_commands @pandoc:slurm:03_jobsubmission: 1 Hits, Last modified: 4 years ago
advanced_topics @doku: 1 Hits, Last modified: 9 years ago
vsc3_queue @doku: 1 Hits, Last modified: 5 months ago
markdown @pandoc:markdown:01_general: 1 Hits, Last modified: 2 years ago
gaussian09 @doku: 1 Hits, Last modified: 14 months ago

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