This version is outdated by a newer approved version.DiffThis version (2017/01/31 10:06) is a draft.
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installation

Run the installer, use default optionx except for the points below:

start_dir=`pwd`
./smrtanalysis_2.3.0.140936.run

#DNS name: localhost
#TOMCAT port: 8090 (8080 in use by cmd)
#TMP directory [/tmp/smrtanalysis] ???
#job management system: NONE
#cores used: 16

Reset MYSQL password:

./smrtanalysis/admin/bin/smrtportald-initd start
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:${start_dir}/smrtanalysis/install/smrtanalysis_2.3.0.140936/redist/mysql-5.1.73/lib/mysql/
${start_dir}/smrtanalysis/install/smrtanalysis_2.3.0.140936/redist/mysql/bin/mysqladmin -u root -S /tmp/mysql_53306.sock password 'asdf'

usage

  • doku/smrtanalysis.1485857208.txt.gz
  • Last modified: 2017/01/31 10:06
  • by markus